Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKS72654.1 | feoA | RN70_01310 | RN70_10805 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
AKS74355.1 | feoA | RN70_10815 | RN70_10805 | Virus attachment p12 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.737 |
AKS74355.1 | feoB | RN70_10815 | RN70_10810 | Virus attachment p12 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.737 |
feoA | AKS72654.1 | RN70_10805 | RN70_01310 | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.684 |
feoA | AKS74355.1 | RN70_10805 | RN70_10815 | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Virus attachment p12 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.737 |
feoA | feoB | RN70_10805 | RN70_10810 | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.952 |
feoB | AKS74355.1 | RN70_10810 | RN70_10815 | Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Virus attachment p12 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.737 |
feoB | feoA | RN70_10810 | RN70_10805 | Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Iron transporter FeoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.952 |