STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGN25736.1Putative signal transduction protein with CBS domains; COG0517 FOG: CBS domain. (193 aa)    
Predicted Functional Partners:
AGN26390.1
Hypothetical protein; COG0517 FOG: CBS domain.
 
    0.728
AGN25558.1
Hypothetical protein; COG0517 FOG: CBS domain.
  
     0.718
AGN25659.1
COG0518 GMP synthase - Glutamine amidotransferase domain.
  
 
 0.691
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
     
 0.578
AGN25735.1
AMMECR1 domain-containing protein.
  
    0.573
AGN25733.1
COG0727 Predicted Fe-S-cluster oxidoreductase.
       0.551
AGN27122.1
GTPase; COG1100 GTPase SAR1 and related small G proteins.
  
 0.544
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.536
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.534
AGN25732.1
COG1958 Small nuclear ribonucleoprotein (snRNP) homolog.
 
     0.518
Your Current Organism:
Methanomassiliicoccus intestinalis
NCBI taxonomy Id: 1295009
Other names: C. Methanomassiliicoccus intestinalis Issoire-Mx1, Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1
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