STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L203_05732Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1080 aa)    
Predicted Functional Partners:
L203_03301
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.963
L203_03810
Elongation factor 1-gamma.
   
 0.962
L203_02725
Elongation factor 1-gamma.
   
 0.962
L203_03905
Aspartate-tRNA ligase.
  
  
 0.932
L203_02914
Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.917
L203_04902
Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.907
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.839
L203_03876
GMP synthase [glutamine-hydrolyzing].
  
  
 0.806
L203_00535
Anaphase-promoting complex subunit 8.
  
  
 0.799
L203_04327
Arginine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.792
Your Current Organism:
Cryptococcus depauperatus
NCBI taxonomy Id: 1295531
Other names: C. depauperatus CBS 7841, Cryptococcus depauperatus CBS 7841, Filobasidiella depauperata CBS 7841, Filobasidiella depauperata CBS7841
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.