STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L202_01899Zn(2)-C6 fungal-type domain-containing protein. (558 aa)    
Predicted Functional Partners:
L202_00209
Ribosomal_L18_c domain-containing protein.
  
 
 0.799
L202_01102
Ribosomal protein L29.
  
 
 0.797
L202_01547
Ribosomal protein L24.
  
   0.780
L202_00108
Ribosomal_L23eN domain-containing protein.
  
 
 0.776
L202_03784
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.734
L202_00534
Uncharacterized protein.
  
   0.711
L202_07092
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
   0.705
L202_08331
Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.680
L202_05490
Uncharacterized protein.
  
 
 0.667
L202_01203
Uncharacterized protein.
  
 
 0.667
Your Current Organism:
Cryptococcus amylolentus
NCBI taxonomy Id: 1295533
Other names: C. amylolentus CBS 6039, Cryptococcus amylolentus CBS 6039, Cryptococcus amylolentus CBS6039
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