STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EZP75777.1phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (441 aa)    
Predicted Functional Partners:
paaA
phenylacetate-CoA oxygenase subunit PaaA.
 
 
 0.991
EZP75774.1
phenylacetate-CoA oxygenase subunit PaaI.
 
 
 0.979
EZP75773.1
phenylacetate-CoA oxygenase subunit PaaJ; COG2151 Predicted metal-sulfur cluster biosynthetic enzyme.
 
  
 0.973
EZP75775.1
phenylacetate-CoA oxygenase subunit PaaH; COG3460 Uncharacterized enzyme of phenylacetate metabolism.
 
 
 0.942
EZP76711.1
COG1541 Coenzyme F390 synthetase.
 
  
 
0.641
EZP75766.1
PaaX family transcriptional regulator; COG3327 Phenylacetic acid-responsive transcriptional repressor.
 
   
 0.632
EZP78194.1
COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism.
  
 
 0.631
EZP75769.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
   
  0.611
EZP75772.1
Ethyl tert-butyl ether degradation EthD.
 
     0.587
hmp
Bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.
    
 0.544
Your Current Organism:
Parageobacillus genomosp.
NCBI taxonomy Id: 1295642
Other names: Geobacillus stearothermophilus NUB3621, P. genomosp. 1, Parageobacillus genomosp. 1, Parageobacillus genomospecies 1, Parageobacillus genospecies 1
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