STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A158NMB7UBP-type domain-containing protein. (1095 aa)    
Predicted Functional Partners:
A0A158NFZ8
Uncharacterized protein.
    
 0.974
A0A158NW00
HDAC_interact domain-containing protein.
    
 0.899
A0A158NEN5
Uncharacterized protein.
    
 0.768
A0A158NG46
WD_REPEATS_REGION domain-containing protein.
   
 0.768
A0A158NED2
Uncharacterized protein.
    
 0.748
A0A158NIR6
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
 
0.716
A0A158NKZ2
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
  
 
 
0.715
A0A158N9W0
Uncharacterized protein.
    
 0.683
A0A158NIW3
Uncharacterized protein.
    
 0.662
H9HUU0_ATTCE
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.654
Your Current Organism:
Atta cephalotes
NCBI taxonomy Id: 12957
Other names: A. cephalotes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.