STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A158NN82Exonuclease domain-containing protein. (688 aa)    
Predicted Functional Partners:
A0A158NE36
Exonuclease domain-containing protein.
   
 0.934
A0A158P2J1
Exonuclease domain-containing protein.
  
  
 
0.914
A0A158NAH3
Exonuclease domain-containing protein.
     
0.902
PAN3
PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]
    
 0.728
A0A158NAL0
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.677
A0A158NL75
Tyrosine--tRNA ligase.
  
  
 0.563
A0A158NTU2
Uncharacterized protein.
     
 0.471
A0A158NCM3
Str_synth domain-containing protein.
   
 
 0.443
A0A158NME1
S1 motif domain-containing protein.
   
 
 0.443
A0A158NN41
Uncharacterized protein; Belongs to the RNR ribonuclease family.
    
 0.433
Your Current Organism:
Atta cephalotes
NCBI taxonomy Id: 12957
Other names: A. cephalotes
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