STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I206_06854Homoserine dehydrogenase. (376 aa)    
Predicted Functional Partners:
I206_04873
Aspartate kinase.
 
 0.996
I206_02668
Homoserine kinase.
  
 0.994
I206_01385
Threonine synthase.
  
 0.994
I206_02404
Acetolactate synthase, small subunit.
  
 
 0.986
I206_04182
Aspartate-semialdehyde dehydrogenase.
  
 0.965
I206_07289
Tryptophan synthase.
   
 
 0.940
I206_00486
5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase.
   
 
 0.928
I206_06880
Hcy-binding domain-containing protein.
  
 
 0.923
I206_01055
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.916
I206_07068
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.911
Your Current Organism:
Kwoniella pini
NCBI taxonomy Id: 1296096
Other names: Cryptococcus pinus CBS 10737, Cryptococcus pinus CBS10737, K. pini CBS 10737, Kwoniella pini CBS 10737
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.