Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
I206_00149 | I206_02046 | A0A1B9IBQ3 | A0A1B9I723 | Glutamine synthetase. | Urea carboxylase. | 0.883 |
I206_00149 | I206_02943 | A0A1B9IBQ3 | A0A1B9I5U2 | Glutamine synthetase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.904 |
I206_00149 | I206_06132 | A0A1B9IBQ3 | A0A1B9HYC2 | Glutamine synthetase. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.829 |
I206_00149 | I206_06306 | A0A1B9IBQ3 | A0A1B9HVV5 | Glutamine synthetase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.895 |
I206_00149 | I206_06424 | A0A1B9IBQ3 | A0A1B9HW75 | Glutamine synthetase. | Dihydrolipoyl dehydrogenase. | 0.848 |
I206_00149 | I206_06862 | A0A1B9IBQ3 | A0A1B9HUZ2 | Glutamine synthetase. | Glutamate synthase (NADPH/NADH). | 0.926 |
I206_00149 | I206_07109 | A0A1B9IBQ3 | A0A1B9HTX2 | Glutamine synthetase. | Aspartate aminotransferase. | 0.456 |
I206_02046 | I206_00149 | A0A1B9I723 | A0A1B9IBQ3 | Urea carboxylase. | Glutamine synthetase. | 0.883 |
I206_02046 | I206_02943 | A0A1B9I723 | A0A1B9I5U2 | Urea carboxylase. | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.888 |
I206_02046 | I206_04072 | A0A1B9I723 | A0A1B9I1X2 | Urea carboxylase. | Citrate synthase; Belongs to the citrate synthase family. | 0.667 |
I206_02046 | I206_06132 | A0A1B9I723 | A0A1B9HYC2 | Urea carboxylase. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.764 |
I206_02046 | I206_06306 | A0A1B9I723 | A0A1B9HVV5 | Urea carboxylase. | NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.886 |
I206_02046 | I206_06862 | A0A1B9I723 | A0A1B9HUZ2 | Urea carboxylase. | Glutamate synthase (NADPH/NADH). | 0.836 |
I206_02046 | I206_07109 | A0A1B9I723 | A0A1B9HTX2 | Urea carboxylase. | Aspartate aminotransferase. | 0.439 |
I206_02046 | I206_07379 | A0A1B9I723 | A0A1B9HTD0 | Urea carboxylase. | Aspartate aminotransferase. | 0.442 |
I206_02046 | I206_07391 | A0A1B9I723 | A0A1B9HTE6 | Urea carboxylase. | Aspartate aminotransferase. | 0.442 |
I206_02943 | I206_00149 | A0A1B9I5U2 | A0A1B9IBQ3 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.904 |
I206_02943 | I206_02046 | A0A1B9I5U2 | A0A1B9I723 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Urea carboxylase. | 0.888 |
I206_02943 | I206_04072 | A0A1B9I5U2 | A0A1B9I1X2 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Citrate synthase; Belongs to the citrate synthase family. | 0.886 |
I206_02943 | I206_06132 | A0A1B9I5U2 | A0A1B9HYC2 | Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | NADPH:adrenodoxin oxidoreductase, mitochondrial. | 0.879 |
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