STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I206_05555Uncharacterized protein. (639 aa)    
Predicted Functional Partners:
I206_03556
Vacuolar protein sorting-associated protein 27.
  
0.999
I206_01123
SH3 domain-containing protein.
    
 0.982
I206_03796
Vacuolar protein-sorting protein BRO1.
   
 0.974
I206_00355
Polyubiquitin.
    
 0.962
I206_01008
Uncharacterized protein.
   
 0.931
I206_06621
Uncharacterized protein.
   
 0.900
I206_07222
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.895
I206_02220
Polyubiquitin.
   
 0.868
I206_00843
CIA30 domain-containing protein.
   
 0.868
I206_06744
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.848
Your Current Organism:
Kwoniella pini
NCBI taxonomy Id: 1296096
Other names: Cryptococcus pinus CBS 10737, Cryptococcus pinus CBS10737, K. pini CBS 10737, Kwoniella pini CBS 10737
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.