Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | I206_00771 | A0A1B9IA97 | A0A1B9ICU1 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | G domain-containing protein. | 0.908 |
ERB1 | I206_01607 | A0A1B9IA97 | A0A1B9I9N3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosomal protein L13. | 0.819 |
ERB1 | I206_04697 | A0A1B9IA97 | A0A1B9I0E8 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribosomal protein L15. | 0.765 |
ERB1 | I206_05891 | A0A1B9IA97 | A0A1B9HXN0 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.858 |
ERB1 | NOP7 | A0A1B9IA97 | A0A1B9IAB8 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.999 |
I206_00771 | ERB1 | A0A1B9ICU1 | A0A1B9IA97 | G domain-containing protein. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.908 |
I206_00771 | I206_01607 | A0A1B9ICU1 | A0A1B9I9N3 | G domain-containing protein. | Ribosomal protein L13. | 0.921 |
I206_00771 | I206_02432 | A0A1B9ICU1 | A0A1B9I857 | G domain-containing protein. | Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.921 |
I206_00771 | I206_02433 | A0A1B9ICU1 | A0A1B9I838 | G domain-containing protein. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.915 |
I206_00771 | I206_04602 | A0A1B9ICU1 | A0A1B9I077 | G domain-containing protein. | Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.926 |
I206_00771 | I206_04697 | A0A1B9ICU1 | A0A1B9I0E8 | G domain-containing protein. | Ribosomal protein L15. | 0.901 |
I206_00771 | I206_04810 | A0A1B9ICU1 | A0A1B9I0Q1 | G domain-containing protein. | Uncharacterized protein. | 0.949 |
I206_00771 | I206_04862 | A0A1B9ICU1 | A0A1B9I0Y1 | G domain-containing protein. | L51_S25_CI-B8 domain-containing protein. | 0.921 |
I206_00771 | I206_05891 | A0A1B9ICU1 | A0A1B9HXN0 | G domain-containing protein. | 50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. | 0.930 |
I206_00771 | NOP7 | A0A1B9ICU1 | A0A1B9IAB8 | G domain-containing protein. | Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.905 |
I206_01607 | ERB1 | A0A1B9I9N3 | A0A1B9IA97 | Ribosomal protein L13. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.819 |
I206_01607 | I206_00771 | A0A1B9I9N3 | A0A1B9ICU1 | Ribosomal protein L13. | G domain-containing protein. | 0.921 |
I206_01607 | I206_02432 | A0A1B9I9N3 | A0A1B9I857 | Ribosomal protein L13. | Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.998 |
I206_01607 | I206_02433 | A0A1B9I9N3 | A0A1B9I838 | Ribosomal protein L13. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.981 |
I206_01607 | I206_04602 | A0A1B9I9N3 | A0A1B9I077 | Ribosomal protein L13. | Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. | 0.998 |
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