STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I316_06747Alpha-ketoglutarate catabolism dioxygenase. (437 aa)    
Predicted Functional Partners:
I316_05732
Stearoyl-CoA desaturase (Delta-9 desaturase).
    
 0.632
I316_02491
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates; Belongs to the fatty acid desaturase type 1 family.
    
 0.632
I316_01123
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.513
I316_06548
DNA-directed RNA polymerase I, II, and III subunit RPABC1.
    
  0.512
I316_04375
DNA-directed RNA polymerase II subunit RPB7.
    
  0.512
I316_00434
DNA-directed RNA polymerase I, II, and III subunit RPABC3.
    
  0.512
I316_07704
DNA-directed RNA polymerase II subunit RPB3.
    
  0.503
I316_02497
DNA-directed RNA polymerase II subunit RPB4.
    
  0.500
I316_01806
DNA-directed RNA polymerase II subunit RPB11.
    
  0.499
I316_00858
DNA-directed RNA polymerase I, II, and III subunit RPABC4.
    
  0.499
Your Current Organism:
Kwoniella heveanensis
NCBI taxonomy Id: 1296120
Other names: Cryptococcus heveanensis BCC8398, K. heveanensis BCC8398, Kwoniella heveanensis BCC8398
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