STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I303_06394Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family. (146 aa)    
Predicted Functional Partners:
I303_07846
54S ribosomal protein L27, mitochondrial.
  
 
 0.998
I303_07106
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.998
I303_06059
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.998
I303_05183
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
 
 
 0.998
I303_03700
Ribosomal protein L13.
  
 0.998
I303_00775
Ribosomal protein S16.
   
 
 0.998
I303_07806
Ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.997
I303_06700
Ribosomal protein L15.
  
 0.997
I303_02848
Ribosomal protein L19.
  
 
 0.997
I303_07295
50S small subunit ribosomal protein L2.
  
 0.996
Your Current Organism:
Kwoniella dejecticola
NCBI taxonomy Id: 1296121
Other names: Cryptococcus dejecticola CBS 10117, K. dejecticola CBS 10117, Kwoniella dejecticola CBS 10117
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.