STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I303_05194ATP-dependent Clp protease proteolytic subunit. (263 aa)    
Predicted Functional Partners:
I303_00273
ATP-dependent Clp protease ATP-binding subunit ClpX.
 0.999
I303_05999
ATP-dependent Clp protease ATP-binding subunit ClpB.
  
 
 0.973
I303_04252
Heat shock protein; Belongs to the ClpA/ClpB family.
  
 
 0.973
I303_00818
Uncharacterized protein; Belongs to the GrpE family.
   
 
 0.858
I303_03625
Chaperonin GroES; Belongs to the GroES chaperonin family.
  
 
 0.849
I303_07110
NADH-quinone oxidoreductase subunit I.
   
 
 0.838
I303_07256
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.838
I303_06583
Uncharacterized protein.
  
 
 0.798
I303_04306
Chaperone DnaK; Belongs to the heat shock protein 70 family.
   
 
 0.770
I303_08218
Ribosomal protein L7/L12.
   
 
 0.743
Your Current Organism:
Kwoniella dejecticola
NCBI taxonomy Id: 1296121
Other names: Cryptococcus dejecticola CBS 10117, K. dejecticola CBS 10117, Kwoniella dejecticola CBS 10117
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