STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP91212.1Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (460 aa)    
Predicted Functional Partners:
treC
Alpha,alpha-phosphotrehalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
malZ
Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
   
 0.811
AOP91594.1
Sugar phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
amyA
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
AOP92689.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
malS
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
arcA
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.793
folM
Dihydromonapterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.766
arcC
Carbamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbamate kinase family.
 
  
 0.747
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily.
    
 0.734
Your Current Organism:
Enterobacter hormaechei xiangfangensis
NCBI taxonomy Id: 1296536
Other names: CCUG 62994, E. hormaechei subsp. xiangfangensis, Enterobacter hormaechei subsp. xiangfangensis, Enterobacter sp. 10-17, Enterobacter xiangfangensis, Enterobacter xiangfangensis Gu et al. 2014, LMG 27195, LMG:27195, NCIMB 14836, strain 10-17
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