STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT32738.1Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (547 aa)    
Predicted Functional Partners:
SFT32731.1
Uncharacterized membrane protein, DUF485 family.
 
  
 0.998
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.587
SFT63330.1
acetyl-CoA synthetase.
  
  
 0.571
SFT32725.1
Rieske [2Fe-2S] domain-containing protein.
       0.523
SFT42857.1
TIGR03089 family protein.
  
  
 0.521
SFT62648.1
acetoacetyl-CoA synthetase.
  
  
 0.521
SFT69574.1
acetoacetyl-CoA synthetase.
  
  
 0.521
SFT90773.1
acetoacetyl-CoA synthetase.
  
  
 0.521
SFT95826.1
acetoacetyl-CoA synthetase.
  
  
 0.521
SFT96227.1
acetoacetyl-CoA synthetase.
  
  
 0.521
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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