STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT36096.1Hypothetical protein. (182 aa)    
Predicted Functional Partners:
SFT41977.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.658
SFT71969.1
Hypothetical protein.
  
 0.652
SFT65217.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.639
SFT34977.1
Alpha-1,2-mannosyltransferase.
    
 
 0.600
SFT98548.1
Hypothetical protein.
  
   0.598
SFT91934.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
   
 
 0.551
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
 
 0.551
SFT61756.1
IPT/TIG domain-containing protein.
  
 0.505
SFT68235.1
Subtilase family protein; Belongs to the peptidase S8 family.
  
 0.505
SFT86660.1
Subtilase family protein.
  
 0.505
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.