STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT42946.1Acyl-CoA dehydrogenase. (389 aa)    
Predicted Functional Partners:
SFT75670.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.968
SFT75679.1
Electron transfer flavoprotein beta subunit.
 
 0.932
SFT93811.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.842
SFT57666.1
enoyl-CoA hydratase.
  
  0.783
SFT66874.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.783
purK
5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).
  
    0.775
purE
5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.773
SFT94076.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.735
SFT97246.1
Enoyl-CoA hydratase/carnithine racemase.
   
 0.728
SFU03958.1
(R)-ethylmalonyl-CoA mutase.
  
 
 0.722
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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