STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT53899.1Site-specific recombinase XerD; Belongs to the 'phage' integrase family. (307 aa)    
Predicted Functional Partners:
SFT65217.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
   
 0.720
SFU06809.1
Phage integrase family protein.
  
     0.718
SFT53887.1
DNA ligase D, polymerase domain-containing protein.
       0.615
SFT53876.1
Alpha/beta hydrolase fold.
       0.549
SFT99109.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
  
 0.543
SFT58548.1
Chromosome partitioning protein.
 
     0.501
SFT60877.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.498
SFT99102.1
Chromosome partitioning protein.
 
     0.492
SFT97004.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.466
SFT53867.1
ATP-dependent DNA ligase.
       0.463
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.