STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT58291.1Multiple sugar transport system substrate-binding protein. (442 aa)    
Predicted Functional Partners:
SFT58301.1
Multiple sugar transport system permease protein.
 0.989
SFT58309.1
Multiple sugar transport system permease protein.
 
 0.965
SFT65273.1
Multiple sugar transport system permease protein.
 
 0.892
SFT93835.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.886
SFU01961.1
Cellobiose ABC transporter membrane protein.
 
 0.881
SFT65280.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
 
 0.871
SFT58093.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.866
SFT33279.1
N,N'-diacetylchitobiose transport system permease protein.
  
 0.854
SFT93842.1
Raffinose/stachyose/melibiose transport system permease protein.
 
 0.842
SFU01956.1
Cellobiose ABC transporter membrane protein.
 
 0.842
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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