STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT67187.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
SFT67171.1
Protein of unknown function.
      0.823
SFT67201.1
Hypothetical protein.
       0.757
SFT67159.1
Hypothetical protein.
       0.709
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.703
SFT82360.1
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; In the N-terminal section; belongs to the DHBP synthase family.
    
  0.703
SFU08608.1
Hypothetical protein.
  
 
 0.689
SFT68725.1
Flagellum-specific ATP synthase.
  
 
 0.530
SFT41977.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
    0.458
SFT67218.1
Tellurium resistance protein TerD.
       0.431
SFT62113.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
    0.411
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.