STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT82834.1Antibiotic biosynthesis monooxygenase. (92 aa)    
Predicted Functional Partners:
SFU04047.1
FoF1-type ATP synthase assembly protein I.
  
     0.696
SFT82827.1
Hypothetical protein.
 
     0.685
SFT41408.1
Protein of unknown function.
  
     0.624
SFT75284.1
Hypothetical protein.
  
     0.553
SFT82841.1
Hypothetical protein.
       0.553
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.551
SFT66288.1
Hypothetical protein.
  
    0.548
SFT40285.1
Hypothetical protein.
  
     0.534
SFT63791.1
Transcriptional attenuator, LytR family.
  
     0.518
SFT82667.1
Hypothetical protein.
  
     0.512
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.