STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT93600.1Acyl dehydratase. (177 aa)    
Predicted Functional Partners:
SFT93611.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.969
SFT93618.1
acyl-CoA dehydrogenase.
 
 0.855
SFT93582.1
formyl-CoA transferase; Belongs to the CoA-transferase III family.
    
  0.831
SFT93627.1
crotonobetaine/carnitine-CoA ligase.
 
     0.824
SFT93565.1
Hypothetical protein.
 
     0.821
SFT93576.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
  0.790
SFT93592.1
Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
  0.788
SFT93554.1
2-ketocyclohexanecarboxyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.773
SFU04927.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.758
SFT94076.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.753
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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