STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT99324.1Ferredoxin-NADP reductase. (372 aa)    
Predicted Functional Partners:
SFT99315.1
linoleoyl-CoA desaturase.
 
 0.999
SFT75659.1
Cysteine desulfurase.
  
 0.931
SFT57737.1
Sarcosine oxidase subunit alpha.
  
 0.925
SFT73083.1
Glutamate synthase (NADH) small subunit.
   
 0.925
SFU06016.1
ferredoxin--NADP+ reductase.
   
 0.925
SFT53458.1
Nitrogen fixation protein NifU.
  
 0.917
SFT99914.1
Fatty acid desaturase.
  
 
 0.910
SFT35845.1
precorrin-3B synthase.
   
 0.901
SFU00342.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.901
SFT99333.1
PucR C-terminal helix-turn-helix domain-containing protein.
 
     0.899
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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