STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU02383.1Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)    
Predicted Functional Partners:
SFU07685.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.973
SFT81928.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.968
SFU03903.1
3-hydroxyacyl-CoA dehydrogenase.
 0.954
SFT86432.1
3-hydroxybutyryl-CoA dehydrogenase.
 0.929
SFT96339.1
Ketoreductase RED1.
 0.886
SFU05696.1
enoyl-CoA hydratase.
  
     0.771
SFT91438.1
Anti-anti-sigma factor.
    
 0.738
rpsI
Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.697
rpmG
LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.
    
 
 0.697
rpsP
SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.
    
   0.696
Your Current Organism:
Geodermatophilus amargosae
NCBI taxonomy Id: 1296565
Other names: ATCC 25081, CCUG 62971, DSM 46136, G. amargosae, Geodermatophilus amargosae Montero-Calasanz et al. 2014, Geodermatophilus obscurus subsp. amargosae, Geodermatophilus sp. DSM 46136, JCM 3153, KCTC 9360, MTCC 11559, NBRC 13316, NRRL B-3578, strain G12
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