STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H845_2430Hypothetical protein. (89 aa)    
Predicted Functional Partners:
H845_2431
Hypothetical protein.
     
 0.828
H845_2417
Transcriptional regulator, LysR family.
  
     0.743
H845_2450
Putative membrane protein; CytoplasmicMembrane.
  
     0.615
H845_2452
Hypothetical protein; Cytoplasmic.
  
     0.609
H845_2428
Hypothetical protein; CytoplasmicMembrane.
       0.511
H845_2429
Putative conjugal transfer protein traG; CytoplasmicMembrane.
       0.511
H845_1423
TonB-dependent ferrichrome siderophore receptor; [H] Coenzyme transport and metabolism; [K] Transcription; [P] Inorganic ion transport and metabolism; [S] Function unknown; OuterMembrane.
  
     0.505
H845_2419
Putative conjugation TrbI-like protein; CytoplasmicMembrane.
 
     0.488
H845_1175
Methylamine dehydrogenase heavy chain; Periplasmic.
  
     0.483
H845_3089
Hypothetical protein; CytoplasmicMembrane.
  
     0.477
Your Current Organism:
Komagataeibacter xylinus E25
NCBI taxonomy Id: 1296990
Other names: Gluconacetobacter xylinus E25, Gluconobacter xylinus E25, K. xylinus E25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.