STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H845_913Fatty acid hydroxylase; CytoplasmicMembrane. (260 aa)    
Predicted Functional Partners:
H845_917
Diacylglycerol kinase catalytic region.
 
 
 0.920
H845_912
Hypothetical protein; [H] Coenzyme transport and metabolism; [U] Intracellular trafficking, secretion, and vesicular transport; [M] Cell wall/membrane/envelope biogenesis; [I] Lipid transport and metabolism; [L] Replication, recombination and repair; [S] Function unknown.
 
     0.913
H845_915
Putative permease; CytoplasmicMembrane.
 
     0.879
H845_916
Putative metallophosphoesterase; [G] Carbohydrate transport and metabolism; [R] general function prediction only; [M] Cell wall/membrane/envelope biogenesis; [L] Replication, recombination and repair; Cytoplasmic.
 
    0.876
H845_914
Permease YjgP/YjgQ family protein; CytoplasmicMembrane.
 
     0.852
H845_918
Hypothetical protein; Cytoplasmic.
 
     0.839
H845_2191
Hypothetical protein; CytoplasmicMembrane.
  
 
 0.779
H845_2357
Squalene--hopene cyclase; CytoplasmicMembrane.
   
 
 0.750
H845_920
Phosphopantetheine-binding protein.
  
   
 0.743
H845_911
Hypothetical protein.
       0.734
Your Current Organism:
Komagataeibacter xylinus E25
NCBI taxonomy Id: 1296990
Other names: Gluconacetobacter xylinus E25, Gluconobacter xylinus E25, K. xylinus E25
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