STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCV04256.1Cysteine synthase. (474 aa)    
Predicted Functional Partners:
metB
Cystathionine gamma-synthase, PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.997
cysE
Serine acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.991
cysA
Putative cystathionine gamma-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.982
metC
Cystathionine beta-lyase, PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
 
 0.980
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
  
 0.976
CCV04246.1
Cysteine synthase (fragment).
  
  
  0.942
mdeA
Methionine gamma-lyase.
 
 0.921
CCV07706.1
Phosphoserine phosphatase SerB.
    
 0.920
metC-3
Putative cystathionine beta-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.919
metC-4
Putative cystathionine beta-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.919
Your Current Organism:
Mesorhizobium metallidurans
NCBI taxonomy Id: 1297569
Other names: M. metallidurans STM 2683, Mesorhizobium metallidurans LMG 24485, Mesorhizobium metallidurans STM 2683
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