STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCV04997.1Methyltransferase type 11. (264 aa)    
Predicted Functional Partners:
CCV04998.1
Transcriptional regulator, TetR family.
 
 
   0.860
CCV04999.1
Spermidine/putrescine ABC transporter,periplasmic spermidine/putrescine-binding protein.
 
     0.763
CCV04996.1
FAD dependent oxidoreductase.
 
 
  0.700
CCV04995.1
Phytoene dehydrogenase.
 
 
  0.659
CCV04994.1
Glycine cleavage T protein (Aminomethyl transferase); Belongs to the GcvT family.
 
  
  0.643
CCV06957.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.619
CCV05000.1
Spermidine/putrescine-binding protein.
 
     0.608
gcvP
Glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.527
CCV04993.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.495
CCV08584.1
Mur ligase middle domain protein.
    
 0.471
Your Current Organism:
Mesorhizobium metallidurans
NCBI taxonomy Id: 1297569
Other names: M. metallidurans STM 2683, Mesorhizobium metallidurans LMG 24485, Mesorhizobium metallidurans STM 2683
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.