STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCV07459.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (414 aa)    
Predicted Functional Partners:
CCV07460.1
Sensor protein.
  
 0.951
CCV02988.1
Hypothetical protein; No homology to any previously reported sequences.
 
    0.913
CCV05334.1
Sensor protein.
  
  
 0.646
CCV05671.1
Putative PAS/PAC sensor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
  0.568
omp2b
Porin omp2b; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
    0.517
omp2b-3
Porin omp2b; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
    0.517
omp2b-4
Porin omp2b; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
    0.517
CCV07458.1
Putative carbon-monoxide dehydrogenase small subunit, coxS-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.505
CCV04216.1
Two-component, sensor histidine kinase.
   
    0.503
CCV05009.1
Sensor protein.
 
  
 0.491
Your Current Organism:
Mesorhizobium metallidurans
NCBI taxonomy Id: 1297569
Other names: M. metallidurans STM 2683, Mesorhizobium metallidurans LMG 24485, Mesorhizobium metallidurans STM 2683
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.