STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92434.1Sortase A, LPXTG specific. (247 aa)    
Predicted Functional Partners:
ALP92435.1
Transcriptional regulator, SARP family protein.
 
     0.847
ALP92433.1
Transglutaminase-like enzyme, putative cysteine protease.
 
     0.835
ALP92431.1
Hypothetical protein.
 
     0.683
ALP92432.1
Type IV fimbrial assembly protein PilC.
 
     0.649
ALP92430.1
Hypothetical protein.
 
     0.591
ALP92436.1
Hypothetical protein.
       0.584
ALP93084.1
Von Willebrand factor type A domain protein.
  
  
 0.523
ALP92438.1
Hypothetical protein.
 
    0.521
ALP95343.1
5'-nucleotidase.
  
  
 0.510
ALP95344.1
5'-nucleotidase.
  
  
 0.503
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.