STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92516.1Recombination protein gp47. (354 aa)    
Predicted Functional Partners:
recD2
RecD-like DNA helicase YrrC; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.
 
     0.776
ALP92457.1
Ribosomal protein S1.
  
     0.758
ALP92452.1
Hypothetical protein; FIG00519347.
  
     0.735
ALP92451.1
Hypothetical protein; FIG00513302.
  
     0.716
ALP92483.1
Hypothetical protein.
 
     0.696
ALP94307.1
DNA primase.
 
     0.648
ALP92456.1
Hypothetical protein; FIG00531449.
  
     0.620
ALP92481.1
Hypothetical protein.
 
     0.609
ALP92492.1
Hypothetical protein.
  
     0.585
ALP92514.1
Hypothetical protein.
       0.570
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.