STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92617.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (280 aa)    
Predicted Functional Partners:
ALP92920.1
Rod shape-determining protein MreB.
 
 
 0.984
ALP92619.1
Penicillin-binding protein 2 (PBP-2).
 
 
 0.971
ALP92616.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.920
ALP92932.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
  
 0.834
ALP93420.1
Cell division protein FtsI; Peptidoglycan synthetase.
 
 
 0.801
ALP93846.1
Cell division protein FtsI; Peptidoglycan synthetase.
 
 
 0.756
ALP92618.1
Hypothetical protein.
       0.751
ALP95764.1
Septum site-determining protein MinD.
  
    0.730
ALP94182.1
Cell division protein FtsW; Belongs to the SEDS family.
 
  
 0.660
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.626
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.