STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92721.1Beta-lactamase. (253 aa)    
Predicted Functional Partners:
ALP92829.1
Beta-lactamase.
 
  
 
0.926
ALP92722.1
N-acyl-D-amino-acid deacylase.
 
     0.786
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.696
ALP92719.1
Sodium:alanine symporter.
       0.623
ALP92720.1
Sodium/alanine symporter family protein.
       0.623
ALP92828.1
Hypothetical protein.
    0.533
ALP92747.1
D-aminopeptidase.
 
     0.516
ALP92835.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TC 3.A.1.5.1.
 
     0.440
ALP92718.1
Hypothetical protein.
       0.433
ALP92830.1
Muramoyltetrapeptide carboxypeptidase.
 
     0.421
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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