STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92722.1N-acyl-D-amino-acid deacylase. (451 aa)    
Predicted Functional Partners:
ALP92721.1
Beta-lactamase.
 
     0.786
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.752
ALP92795.1
Hypothetical protein.
     0.672
ALP92719.1
Sodium:alanine symporter.
       0.574
ALP92720.1
Sodium/alanine symporter family protein.
       0.574
ALP93228.1
Putative metal-dependent hydrolase with the TIM-barrel fold.
     0.491
ALP92822.1
Putative amino acid amidase.
 
     0.459
ALP94828.1
D-aminopeptidase dipeptide-binding protein DppA.
 
     0.451
ALP95369.1
Hypothetical protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.446
ALP92794.1
Exoenzymes regulatory protein AepA precursor.
  
   
 0.426
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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