STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92764.1Transcriptional regulator, XRE family. (98 aa)    
Predicted Functional Partners:
ALP95753.1
HTH-type transcriptional regulator xre.
  
     0.742
ALP92545.1
Hypothetical protein.
  
     0.721
ALP94842.1
Zinc finger domain-containing protein.
 
     0.716
ALP94700.1
Repressor (CI-like).
  
     0.710
ALP93226.1
Hypothetical protein.
  
     0.690
ALP93127.1
Hypothetical protein.
  
     0.686
ALP95278.1
Hypothetical protein.
  
     0.671
ALP92744.1
Transcriptional regulator, XRE family.
  
     0.546
ALP92763.1
Hypothetical protein.
       0.543
ALP92765.1
Phosphoesterase.
       0.528
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.