STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92808.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
ALP95397.1
Hypothetical protein.
 
   
 0.745
ALP92909.1
Hypothetical protein.
 
     0.740
ALP95506.1
Hypothetical protein.
  
     0.687
ALP93436.1
Hypothetical protein.
  
     0.653
ALP95399.1
Hypothetical protein.
  
     0.642
ALP95404.1
Hypothetical protein.
  
     0.637
ALP92669.1
Branched-chain amino acid transport system permease protein LivM; TC 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
   
   0.551
ALP95588.1
Branched-chain amino acid transport system permease protein LivM; TC 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
   
   0.551
ALP93465.1
Hypothetical protein.
 
    0.503
ALP92599.1
Hypothetical protein.
  
     0.493
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.