STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92827.1Cytochrome c-type biogenesis protein CcdA (DsbD like) / Cytochrome c-type biogenesis protein ResA. (434 aa)    
Predicted Functional Partners:
msrA
Peptide methionine sulfoxide reductase MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
  
 0.888
ALP94223.1
Hypothetical protein.
  
  
 0.776
ALP94382.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
 
 0.734
ALP93440.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.725
ALP93650.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.725
ALP92497.1
Alkyl hydroperoxide reductase protein F.
  
  
 0.709
ALP93453.1
Hypothetical protein.
 
  
 0.683
hemL
Glutamate-1-semialdehyde aminotransferase.
  
  
 0.641
ALP93532.1
Oxidoreductase.
 
  
 0.622
ALP94685.1
Two-component response regulator yesN.
 
   
 0.622
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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