STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92829.1Beta-lactamase. (263 aa)    
Predicted Functional Partners:
ALP92828.1
Hypothetical protein.
    0.951
ALP92721.1
Beta-lactamase.
 
  
 
0.926
ALP92830.1
Muramoyltetrapeptide carboxypeptidase.
 
     0.882
ALP92836.1
L-alanine-DL-glutamate epimerase.
 
     0.683
ALP92833.1
Oligopeptide transport system permease protein OppC; TC 3.A.1.5.1.
 
     0.658
ALP92835.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TC 3.A.1.5.1.
 
     0.634
ALP92834.1
Oligopeptide transport system permease protein OppB; TC 3.A.1.5.1.
 
     0.628
ALP92832.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
       0.570
ALP92831.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
       0.568
ALP92747.1
D-aminopeptidase.
 
     0.546
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.