STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92839.1D-binding response regulator KdpE. (243 aa)    
Predicted Functional Partners:
ALP92840.1
Osmosensitive K+ channel histidine kinase KdpD.
 0.996
ALP93053.1
Hypothetical protein.
   0.820
ALP94983.1
Phosphate regulon sensor protein PhoR (SphS).
 
 0.811
ALP95036.1
Phosphate regulon sensor protein PhoR (SphS).
   0.810
ALP94242.1
Sensor histidine kinase.
 
   0.797
ALP94850.1
Two-component hybrid sensor and regulator.
 
   0.797
ALP94541.1
Phosphate regulon sensor protein PhoR (SphS).
 
 0.780
ALP95501.1
Hypothetical protein.
   0.777
ALP93735.1
Sensor histidine kinase.
 
 0.743
ALP93542.1
Sensor histidine kinase.
   0.741
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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