STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92889.1Phage tail fiber protein. (152 aa)    
Predicted Functional Partners:
ALP92888.1
Phage-like element PBSX protein xkdK.
 
    0.950
ALP92890.1
Phage protein.
 
    0.938
ALP92881.1
Phage portal protein.
 
  
 0.880
ALP92897.1
Phage-like element PBSX protein xkdS.
 
    0.857
ALP92895.1
Phage-like element PBSX protein xkdQ.
 
     0.855
ALP92894.1
Phage-like element PBSX protein xkdP.
 
    0.853
ALP92903.1
Phage baseplate.
 
    0.847
ALP94625.1
Hypothetical protein.
 
    0.829
ALP92893.1
Hypothetical protein.
 
     0.825
ALP94626.1
Phage-like element pbsx protein xkdS.
 
    0.816
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.