STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP92994.1Methylmalonyl-CoA epimerase. (135 aa)    
Predicted Functional Partners:
ALP92988.1
Methylmalonyl-CoA mutase.
  
 0.991
ALP92989.1
Methylmalonyl-CoA mutase.
 
  
 0.991
ALP92993.1
Acetyl-coenzyme A carboxyl transferase alpha chain.
 
 
 0.976
ALP93015.1
Periplasmic protein kinase ArgK; GTPases of G3E family.
   
 0.951
ALP95375.1
Methylmalonyl-CoA epimerase.
 
  
0.929
ALP92992.1
Hypothetical protein; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.
       0.657
ALP92990.1
Oxaloacetate decarboxylase beta chain; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
     0.606
ALP94718.1
Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
  
 0.534
ALP92995.1
Hypothetical protein.
       0.490
ALP92991.1
Biotin carboxyl carrier protein of oxaloacetate decarboxylase.
  
  
 0.483
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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