STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93035.1Putative RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (556 aa)    
Predicted Functional Partners:
ALP93033.1
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.992
ALP93034.1
Cell division transporter, ATP-binding protein FtsE; TC 3.A.5.1.1.
 
 0.992
ALP93154.1
Hypothetical protein.
 
 
 0.987
ALP95529.1
Hypothetical protein.
  
 
 0.982
ALP93217.1
ABC transporter, permease protein.
 
 
 0.968
ALP94537.1
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.968
ALP94538.1
ABC transporter ATP-binding protein.
 
 0.966
ALP93216.1
Cell division transporter, ATP-binding protein FtsE; TC 3.A.5.1.1.
 
 0.961
ALP93032.1
Hypothetical protein.
 
     0.921
ALP95067.1
ABC transporter, ATP-binding protein.
 
 
 0.868
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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