STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93055.1Beta-propeller domains of methanol dehydrogenase type. (339 aa)    
Predicted Functional Partners:
ALP93057.1
Hypothetical protein.
 
     0.875
ALP93532.1
Oxidoreductase.
  
   0.754
ALP92422.1
Hypothetical protein.
  
     0.737
ALP93056.1
Tellurite resistance protein; Belongs to the TelA family.
 
     0.737
ALP95334.1
Hypothetical protein.
 
     0.665
ALP94664.1
Lipoprotein, putative.
  
     0.664
ALP93847.1
Cell division protein FtsW; Belongs to the SEDS family.
  
 
   0.619
ALP93484.1
Primosomal protein N' (replication factor Y) - superfamily II helicase.
  
  
 0.608
ALP94562.1
Hypothetical protein.
 
     0.589
ALP94486.1
Hypothetical protein.
 
     0.576
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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