STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93088.1Cytidylate kinase. (197 aa)    
Predicted Functional Partners:
ALP93087.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.976
ALP92845.1
Hypothetical protein.
      0.900
ALP95256.1
Hypothetical protein.
      0.900
ALP93773.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.898
ALP94668.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.879
ALP93795.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
     0.786
ALP93280.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.763
ALP92530.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.747
ALP92532.1
Multi antimicrobial extrusion protein (Na(+)/drug antiporter).
      0.714
rplV
LSU ribosomal protein L22p (L17e); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.
  
    0.576
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.