STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93090.1Oxidoreductase, aldo/keto reductase family. (340 aa)    
Predicted Functional Partners:
ALP93091.1
DP-dependent malic enzyme.
  
    0.700
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.693
ALP93093.1
Hypothetical protein.
       0.693
ALP95120.1
Aldo-keto reductase.
 
     0.603
ALP93089.1
Hypothetical protein.
       0.531
ALP93805.1
Putative oxidoreductase.
 
     0.528
ALP93094.1
Transcriptional regulator, TetRNA family.
       0.486
ALP93462.1
Protein of unknown function DUF1121.
  
   0.482
ALP93095.1
Hypothetical protein.
       0.463
ALP93096.1
Hypothetical protein.
       0.463
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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