STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (455 aa)    
Predicted Functional Partners:
ALP93091.1
DP-dependent malic enzyme.
  
 
 0.990
ALP95567.1
Fumarate hydratase class I, aerobic.
  
 
 0.938
ALP95568.1
Fumarate hydratase class I, aerobic.
  
 
 0.938
ALP92749.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 0.908
ALP95081.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 0.908
ALP94206.1
Aspartate aminotransferase.
   
 0.831
ALP94905.1
Biosynthetic Aromatic amino acid aminotransferase alpha.
   
 0.831
argH
Argininosuccinate lyase.
   
 
0.829
ALP93093.1
Hypothetical protein.
       0.773
ALP92728.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.698
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.