STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93154.1Hypothetical protein. (488 aa)    
Predicted Functional Partners:
ALP93035.1
Putative RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.987
ALP93215.1
Efflux transporter, RND family, MFP subunit.
 
 
 0.836
ALP92574.1
Hypothetical protein.
 
 
 0.794
ALP92599.1
Hypothetical protein.
 
   
 0.782
ALP92909.1
Hypothetical protein.
  
   
 0.779
ALP95397.1
Hypothetical protein.
 
  
 0.776
ALP95399.1
Hypothetical protein.
  
     0.773
ALP95404.1
Hypothetical protein.
  
     0.773
ALP94448.1
Hypothetical protein.
 
     0.771
ALP93746.1
Hypothetical protein.
 
  
 0.770
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.