STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93157.1Hypothetical protein; Belongs to the 'phage' integrase family. (392 aa)    
Predicted Functional Partners:
ALP93158.1
Hypothetical protein.
 
    
0.783
ALP93159.1
2-dehydro-3-deoxygluconate kinase.
       0.485
xerC
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
  
  
 0.470
ALP94037.1
Putative integrase/recombinase; Belongs to the 'phage' integrase family.
  
  
 0.459
ALP92921.1
Hypothetical protein.
   
    0.455
ALP93156.1
Putative ATPase (AAA+ superfamily).
       0.455
ALP95398.1
Prophage LambdaBa04, site-specific recombinase, phage integrase family; Belongs to the 'phage' integrase family.
  
     0.452
ALP92867.1
Phage protein.
 
  
 0.447
ALP93852.1
Hypothetical protein.
  
    0.446
ALP94994.1
Arogenate dehydrogenase.
  
    0.442
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.