STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaC-2Uronate isomerase. (467 aa)    
Predicted Functional Partners:
ALP92693.1
Altronate oxidoreductase.
 
 
 0.974
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.968
ALP92705.1
D-mannonate oxidoreductase.
 
 
 0.957
uxaC
Uronate isomerase.
  
  
 
0.903
ALP93164.1
D-mannonate oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.882
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.879
ALP93167.1
Uronate isomerase.
   
 0.822
ALP93168.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.787
ALP92694.1
Altronate hydrolase.
  
 0.735
ALP93161.1
4-Hydroxy-2-oxoglutarate aldolase.
     
 0.668
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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